Machine Learning/HMM
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Hidden Markov Models[edit | edit source]
Papers/Tutorials[edit | edit source]
Implementations[edit | edit source]
- GHMM (C)
- HMMER (compiled C-apps for Protein (possibly speech) analysis)
- logilab-hmm (Python)
- HMM Toolbox (MATLAB)
- jahmm (Java)
- I found Mathieu Blondel's writeup really helpful -- jahmm is a good package
R[edit | edit source]
- HMM: very simple hidden markov models
- hmm.discnp: allows observations of multiple runs
- msm: continuous time, with covariates, multiple runs
- Example